STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL11A2Collagen type XI alpha 2 chain. (1650 aa)    
Predicted Functional Partners:
COL5A2
Collagen type V alpha 2 chain.
  
0.704
COL2A1
Collagen type II alpha 1 chain.
  
0.654
PPP1R12A
Protein phosphatase 1 regulatory subunit.
    
 0.646
SKIV2L
Ski2 like RNA helicase.
    
 0.635
RXRB
Retinoid X receptor beta.
    
 
 0.630
PCOLCE
Procollagen C-endopeptidase enhancer.
   
 0.627
TINAG
Tubulointerstitial nephritis antigen; Belongs to the peptidase C1 family.
   
 
 0.624
VPS52
VPS52 subunit of GARP complex.
      
 0.620
BAG2
BCL2 associated athanogene 2.
      
 0.619
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.592
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.