STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHSRPKH-type splicing regulatory protein. (747 aa)    
Predicted Functional Partners:
PARN
Poly(A)-specific ribonuclease.
   
 0.780
PUF60
Poly(U) binding splicing factor 60.
   
 
 0.753
YWHAZ
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
   
 
 0.730
HNRNPL
Heterogeneous nuclear ribonucleoprotein L.
   
 
 0.695
DROSHA
Drosha ribonuclease III.
   
 
 0.662
DICER1
Dicer 1, ribonuclease III; Belongs to the helicase family. Dicer subfamily.
    
 
 0.635
ZFP36
ZFP36 ring finger protein.
    
 
 0.626
KHDRBS1
KH RNA binding domain containing, signal transduction associated 1.
   
 
 0.619
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 
 0.607
MAPK11
Mitogen-activated protein kinase.
   
 
 0.590
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.