Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GFRA1 | NRTN | ENSCSAP00000001205 | ENSCSAP00000006061 | GDNF family receptor alpha-1; Receptor for GDNF. Mediates the GDNF-induced autophosphorylation and activation of the RET receptor. Belongs to the GDNFR family. | Neurturin. | 0.821 |
GFRA1 | PSPN | ENSCSAP00000001205 | ENSCSAP00000005920 | GDNF family receptor alpha-1; Receptor for GDNF. Mediates the GDNF-induced autophosphorylation and activation of the RET receptor. Belongs to the GDNFR family. | Persephin. | 0.718 |
GFRA1 | RET | ENSCSAP00000001205 | ENSCSAP00000007188 | GDNF family receptor alpha-1; Receptor for GDNF. Mediates the GDNF-induced autophosphorylation and activation of the RET receptor. Belongs to the GDNFR family. | Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands. | 0.984 |
GFRA2 | NRTN | ENSCSAP00000012734 | ENSCSAP00000006061 | GDNF family receptor alpha-2; Receptor for neurturin. Mediates the NRTN-induced autophosphorylation and activation of the RET receptor. Also able to mediate GDNF signaling through the RET tyrosine kinase receptor. | Neurturin. | 0.958 |
GFRA2 | PSPN | ENSCSAP00000012734 | ENSCSAP00000005920 | GDNF family receptor alpha-2; Receptor for neurturin. Mediates the NRTN-induced autophosphorylation and activation of the RET receptor. Also able to mediate GDNF signaling through the RET tyrosine kinase receptor. | Persephin. | 0.738 |
GFRA2 | RET | ENSCSAP00000012734 | ENSCSAP00000007188 | GDNF family receptor alpha-2; Receptor for neurturin. Mediates the NRTN-induced autophosphorylation and activation of the RET receptor. Also able to mediate GDNF signaling through the RET tyrosine kinase receptor. | Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands. | 0.968 |
GFRA3 | NRTN | ENSCSAP00000009355 | ENSCSAP00000006061 | GDNF family receptor alpha 3. | Neurturin. | 0.804 |
GFRA3 | PSPN | ENSCSAP00000009355 | ENSCSAP00000005920 | GDNF family receptor alpha 3. | Persephin. | 0.709 |
GFRA3 | RET | ENSCSAP00000009355 | ENSCSAP00000007188 | GDNF family receptor alpha 3. | Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands. | 0.977 |
GFRA4 | NRTN | ENSCSAP00000009340 | ENSCSAP00000006061 | GDNF family receptor alpha 4. | Neurturin. | 0.717 |
GFRA4 | PSPN | ENSCSAP00000009340 | ENSCSAP00000005920 | GDNF family receptor alpha 4. | Persephin. | 0.734 |
GFRA4 | RET | ENSCSAP00000009340 | ENSCSAP00000007188 | GDNF family receptor alpha 4. | Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands. | 0.809 |
GFRAL | NRTN | ENSCSAP00000009401 | ENSCSAP00000006061 | GDNF family receptor alpha like. | Neurturin. | 0.700 |
GFRAL | PSPN | ENSCSAP00000009401 | ENSCSAP00000005920 | GDNF family receptor alpha like. | Persephin. | 0.709 |
GFRAL | RET | ENSCSAP00000009401 | ENSCSAP00000007188 | GDNF family receptor alpha like. | Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands. | 0.744 |
NRTN | GFRA1 | ENSCSAP00000006061 | ENSCSAP00000001205 | Neurturin. | GDNF family receptor alpha-1; Receptor for GDNF. Mediates the GDNF-induced autophosphorylation and activation of the RET receptor. Belongs to the GDNFR family. | 0.821 |
NRTN | GFRA2 | ENSCSAP00000006061 | ENSCSAP00000012734 | Neurturin. | GDNF family receptor alpha-2; Receptor for neurturin. Mediates the NRTN-induced autophosphorylation and activation of the RET receptor. Also able to mediate GDNF signaling through the RET tyrosine kinase receptor. | 0.958 |
NRTN | GFRA3 | ENSCSAP00000006061 | ENSCSAP00000009355 | Neurturin. | GDNF family receptor alpha 3. | 0.804 |
NRTN | GFRA4 | ENSCSAP00000006061 | ENSCSAP00000009340 | Neurturin. | GDNF family receptor alpha 4. | 0.717 |
NRTN | GFRAL | ENSCSAP00000006061 | ENSCSAP00000009401 | Neurturin. | GDNF family receptor alpha like. | 0.700 |
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