STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTSDCathepsin D; Belongs to the peptidase A1 family. (412 aa)    
Predicted Functional Partners:
BCL2
BCL2 apoptosis regulator.
     
 0.909
BCL2L1
BCL2 like 1.
     
 0.903
CTSB
Cathepsin B; Belongs to the peptidase C1 family.
   
 0.787
LAMP1
Lysosomal associated membrane protein 1.
   
 
 0.757
ENSCSAP00000007559
Uncharacterized protein.
   
 
 0.672
XIAP
RING-type domain-containing protein.
    
  0.651
BIRC5
Uncharacterized protein.
    
  0.650
CTSS
Cathepsin S; Belongs to the peptidase C1 family.
   
 0.612
AGT
Angiotensinogen; Belongs to the serpin family.
   
 0.548
PPT1
Palmitoyl-protein thioesterase 1.
  
  
 0.530
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.