STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM28RNA binding motif protein 28. (758 aa)    
Predicted Functional Partners:
CEBPZ
CCAAT enhancer binding protein zeta.
   
 
 0.981
DDX27
DEAD-box helicase 27; Belongs to the DEAD box helicase family.
   
 0.980
DDX24
DEAD-box helicase 24.
   
 0.973
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
 
 0.972
EBNA1BP2
EBNA1 binding protein 2.
   
 
 0.971
RBM34
RNA binding motif protein 34.
   
 
 0.967
RRP12
Ribosomal RNA processing 12 homolog.
   
 
 0.966
PUM3
Pumilio RNA binding family member 3.
   
 
 0.964
GTPBP4
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.963
PDCD11
Programmed cell death 11.
   
 0.950
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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