STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR20WD repeat domain 20. (581 aa)    
Predicted Functional Partners:
WDR48
WD repeat domain 48.
    
 0.932
USP46
Ubiquitin specific peptidase 46; Belongs to the peptidase C19 family.
   
 0.858
ENSCSAP00000005973
USP domain-containing protein; Belongs to the peptidase C19 family.
   
 0.818
USP12
USP domain-containing protein; Belongs to the peptidase C19 family.
   
 0.818
USP35
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
   
 0.687
USP38
Ubiquitin specific peptidase 38; Belongs to the peptidase C19 family.
   
 0.687
USP1
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
   
 0.687
PHLPP2
PH domain and leucine rich repeat protein phosphatase 2.
    
 
 0.634
PHLPP1
PH domain and leucine rich repeat protein phosphatase 1.
    
 
 0.592
MAD2L1
HORMA domain-containing protein.
   
 0.591
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.