STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VRK1VRK serine/threonine kinase 1; Belongs to the protein kinase superfamily. (396 aa)    
Predicted Functional Partners:
BANF1
Barrier to autointegration factor 1.
    
 0.899
BANF2
Barrier to autointegration factor 2.
    
 0.832
ANKLE2
Ankyrin repeat and LEM domain containing 2.
   
 0.807
LTV1
LTV1 ribosome biogenesis factor.
    
 0.768
H2BC5
Histone H2B; Belongs to the histone H2B family.
    
   0.710
BYSL
Bystin like.
    
 0.693
RIOK2
RIO kinase 2.
    
 0.685
LLGL1
LLGL scribble cell polarity complex component 1.
    
 
 0.644
HACE1
HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1.
      
 0.639
TSR1
TSR1 ribosome maturation factor.
    
 0.637
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.