STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGBD5PiggyBac transposable element derived 5. (524 aa)    
Predicted Functional Partners:
CD3E
CD3e molecule.
   
 0.732
XKR7
XK-related protein.
      
 0.718
ZMYM3
Zinc finger MYM-type containing 3.
    
 
 0.636
ZMYM2
Zinc finger MYM-type containing 2.
    
 
 0.634
CD3G
CD3g molecule.
   
 0.634
THAP9
THAP-type domain-containing protein.
    
 
 0.633
CD247
CD247 molecule.
   
 0.628
HARBI1
Harbinger transposase derived 1.
   
  
 0.611
QRICH1
Glutamine rich 1.
    
 
 0.610
PGBD1
PiggyBac transposable element derived 1.
    
 
0.608
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.