STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGCDSarcoglycan delta. (224 aa)    
Predicted Functional Partners:
TIMD4
T cell immunoglobulin and mucin domain containing 4.
      
 0.923
DAG1
Dystroglycan 1.
    
 0.803
SGCB
Sarcoglycan beta.
   
 0.795
SGCA
Sarcoglycan alpha.
   
 0.791
PPP1R11
Protein phosphatase 1 regulatory inhibitor subunit 11.
      
 0.789
SSPN
Sarcospan.
   
 0.770
SETD4
SET domain containing 4.
      
 0.755
SLC5A7
Solute carrier family 5 member 7; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
      
 0.755
PCDH9
Protocadherin 9.
      
 0.753
PPP1R8
Protein phosphatase 1 regulatory subunit 8.
      
 0.737
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
Server load: medium (62%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.