STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SETMARSET domain and mariner transposase fusion gene. (684 aa)    
Predicted Functional Partners:
CDYL
Chromodomain Y like.
   
 0.792
CDYL2
Chromodomain Y like 2.
   
 0.792
CAMKMT
Calmodulin-lysine N-methyltransferase.
     
 0.670
BHLHE40
Basic helix-loop-helix family member e40.
    
 
 0.666
PRPF19
Pre-mRNA processing factor 19.
    
 
 0.661
SUMF1
Sulfatase modifying factor 1.
    
 0.661
ARL8B
ADP ribosylation factor like GTPase 8B; Belongs to the small GTPase superfamily. Arf family.
    
 0.660
ITPR1
Inositol 1,4,5-trisphosphate receptor type 1.
      
 0.655
ASIP
Agouti signaling protein.
      
 0.650
MPHOSPH8
M-phase phosphoprotein 8.
    
 0.644
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.