STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLEC10AC-type lectin domain containing 10A. (315 aa)    
Predicted Functional Partners:
TRIM38
Tripartite motif containing 38.
   
 
 0.581
VSTM1
V-set and transmembrane domain containing 1.
      
 0.524
GPAT4
Glycerol-3-phosphate acyltransferase 4.
      
 0.507
HLX
H2.0 like homeobox.
      
 0.501
UCP2
Uncoupling protein 2; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.463
ACOX1
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 
 0.440
G6PC
Glucose-6-phosphatase; Belongs to the glucose-6-phosphatase family.
      
 0.431
CD4
CD4 molecule.
   
 0.418
FCER1A
Fc fragment of IgE receptor Ia.
   
 0.411
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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