STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS13BVacuolar protein sorting 13 homolog B. (3997 aa)    
Predicted Functional Partners:
H2AJ
Histone H2A; Belongs to the histone H2A family.
      
 0.792
PGAP2
Post-GPI attachment to proteins 2.
   
  
 0.751
RAD23B
RAD23 homolog B, nucleotide excision repair protein.
    
 
 0.680
ZNF462
Zinc finger protein 462.
      
 0.646
GAK
Cyclin G associated kinase.
    
 
 0.634
PCYOX1L
Prenylcysteine oxidase 1 like.
      
 0.629
ACSL3
Acyl-CoA synthetase long chain family member 3.
      
 0.621
VPS13A
Vacuolar protein sorting 13 homolog A.
   
  
0.614
MAP3K7
Mitogen-activated protein kinase kinase kinase 7; Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. MAP kinase kinase kinase subfamily.
    
 
 0.601
AKAP11
A-kinase anchoring protein 11.
   
  
 0.554
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.