STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB8BRAB8B, member RAS oncogene family. (207 aa)    
Predicted Functional Partners:
RAB8A
RAB8A, member RAS oncogene family.
  
 
0.957
SNCAIP
Synuclein alpha interacting protein.
     
 0.932
MICALL2
MICAL like 2.
    
 0.929
PLD1
Phospholipase.
   
 
 0.899
RAB3IP
RAB3A interacting protein.
    
 0.839
RILPL2
Rab interacting lysosomal protein like 2.
   
 
 0.812
PEX5L
Peroxisomal biogenesis factor 5 like.
      
 0.750
RAB3IL1
RAB3A interacting protein like 1.
    
 0.732
OPTN
Optineurin.
   
 0.724
OCRL
OCRL inositol polyphosphate-5-phosphatase.
    
 0.691
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.