STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR90WD repeat domain 90. (1857 aa)    
Predicted Functional Partners:
PACRGL
Parkin coregulated like.
    
 
 0.987
EFHB
EF-hand domain family member B.
    
   0.979
EFHC1
EF-hand domain containing 1.
    
 
 0.870
EFHC2
EF-hand domain containing 2.
    
 
 0.870
HABP2
Hyaluronan binding protein 2.
   
 0.848
F12
Coagulation factor XII.
   
 0.848
HGFAC
HGF activator.
   
 0.848
RIPK4
Receptor interacting serine/threonine kinase 4.
   
 0.825
RNASEL
Ribonuclease L.
   
 0.820
C9orf135
Chromosome 9 open reading frame 135.
    
   0.814
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.