STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM178ATransmembrane protein 178A. (297 aa)    
Predicted Functional Partners:
TMEM204
Transmembrane protein 204.
   
  
 0.651
NICN1
Uncharacterized protein.
      
 0.631
FTSJ3
pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.
      
 0.629
ZNF304
Zinc finger protein 304.
      
 0.627
SNAPC5
Small nuclear RNA activating complex polypeptide 5.
      
 0.622
ADAP1
ArfGAP with dual PH domains 1.
      
 0.620
TNPO2
Transportin 2.
      
 0.617
CAPN15
Calpain 15; Belongs to the peptidase C2 family.
      
 0.617
TMEM94
Transmembrane protein 94.
      
 0.599
KLF3
Kruppel like factor 3.
      
 0.573
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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