Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGO2 | DDX5 | ENSCSAP00000005830 | ENSCSAP00000000375 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | DEAD-box helicase 5; Belongs to the DEAD box helicase family. | 0.658 |
| AGO2 | DHX9 | ENSCSAP00000005830 | ENSCSAP00000008730 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | DExH-box helicase 9. | 0.846 |
| AGO2 | EIF4E | ENSCSAP00000005830 | ENSCSAP00000000480 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family. | 0.724 |
| BRCA1 | DHX9 | ENSCSAP00000014651 | ENSCSAP00000008730 | Uncharacterized protein. | DExH-box helicase 9. | 0.806 |
| CDC40 | DDX5 | ENSCSAP00000011542 | ENSCSAP00000000375 | Cell division cycle 40. | DEAD-box helicase 5; Belongs to the DEAD box helicase family. | 0.676 |
| CDC40 | DHX9 | ENSCSAP00000011542 | ENSCSAP00000008730 | Cell division cycle 40. | DExH-box helicase 9. | 0.853 |
| DDX5 | AGO2 | ENSCSAP00000000375 | ENSCSAP00000005830 | DEAD-box helicase 5; Belongs to the DEAD box helicase family. | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | 0.658 |
| DDX5 | CDC40 | ENSCSAP00000000375 | ENSCSAP00000011542 | DEAD-box helicase 5; Belongs to the DEAD box helicase family. | Cell division cycle 40. | 0.676 |
| DDX5 | DHX9 | ENSCSAP00000000375 | ENSCSAP00000008730 | DEAD-box helicase 5; Belongs to the DEAD box helicase family. | DExH-box helicase 9. | 0.920 |
| DHX9 | AGO2 | ENSCSAP00000008730 | ENSCSAP00000005830 | DExH-box helicase 9. | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | 0.846 |
| DHX9 | BRCA1 | ENSCSAP00000008730 | ENSCSAP00000014651 | DExH-box helicase 9. | Uncharacterized protein. | 0.806 |
| DHX9 | CDC40 | ENSCSAP00000008730 | ENSCSAP00000011542 | DExH-box helicase 9. | Cell division cycle 40. | 0.853 |
| DHX9 | DDX5 | ENSCSAP00000008730 | ENSCSAP00000000375 | DExH-box helicase 9. | DEAD-box helicase 5; Belongs to the DEAD box helicase family. | 0.920 |
| DHX9 | EIF4E | ENSCSAP00000008730 | ENSCSAP00000000480 | DExH-box helicase 9. | Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family. | 0.788 |
| DHX9 | HNRNPU | ENSCSAP00000008730 | ENSCSAP00000005471 | DExH-box helicase 9. | Heterogeneous nuclear ribonucleoprotein U. | 0.877 |
| DHX9 | ILF3 | ENSCSAP00000008730 | ENSCSAP00000003264 | DExH-box helicase 9. | Interleukin enhancer binding factor 3. | 0.788 |
| DHX9 | ITSN2 | ENSCSAP00000008730 | ENSCSAP00000004709 | DExH-box helicase 9. | Intersectin 2. | 0.798 |
| DHX9 | MYD88 | ENSCSAP00000008730 | ENSCSAP00000010525 | DExH-box helicase 9. | Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. | 0.834 |
| DHX9 | PABPN1 | ENSCSAP00000008730 | ENSCSAP00000012101 | DExH-box helicase 9. | Poly(A) binding protein nuclear 1. | 0.820 |
| EIF4E | AGO2 | ENSCSAP00000000480 | ENSCSAP00000005830 | Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family. | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | 0.724 |
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