STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRIT1Uncharacterized protein. (736 aa)    
Predicted Functional Partners:
RAP1B
Uncharacterized protein.
    
 0.987
RAP1A
RAP1A, member of RAS oncogene family.
    
 0.976
CCM2
CCM2 scaffold protein.
    
 
 0.970
ITGB1BP1
Integrin subunit beta 1 binding protein 1.
    
 
 0.950
CTNNB1
Catenin beta 1.
     
 0.926
HEG1
Heart development protein with EGF like domains 1.
    
 
 0.916
SNX17
Sorting nexin 17.
    
 
 0.893
PDCD10
Programmed cell death 10.
    
 
 0.782
CCM2L
CCM2 like scaffold protein.
    
 
 0.775
MUC13
Mucin 13, cell surface associated.
    
 
 0.742
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.