Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CASP3 | CASP7 | ENSCSAP00000015040 | ENSCSAP00000001418 | Caspase 3; Belongs to the peptidase C14A family. | Caspase 7; Belongs to the peptidase C14A family. | 0.963 |
CASP3 | DES | ENSCSAP00000015040 | ENSCSAP00000004323 | Caspase 3; Belongs to the peptidase C14A family. | Desmin; Belongs to the intermediate filament family. | 0.481 |
CASP3 | GFAP | ENSCSAP00000015040 | ENSCSAP00000014429 | Caspase 3; Belongs to the peptidase C14A family. | Glial fibrillary acidic protein; Belongs to the intermediate filament family. | 0.786 |
CASP3 | PAX6 | ENSCSAP00000015040 | ENSCSAP00000001567 | Caspase 3; Belongs to the peptidase C14A family. | Paired box 6. | 0.511 |
CASP3 | VIM | ENSCSAP00000015040 | ENSCSAP00000008880 | Caspase 3; Belongs to the peptidase C14A family. | Vimentin; Belongs to the intermediate filament family. | 0.563 |
CASP7 | CASP3 | ENSCSAP00000001418 | ENSCSAP00000015040 | Caspase 7; Belongs to the peptidase C14A family. | Caspase 3; Belongs to the peptidase C14A family. | 0.963 |
CASP7 | DES | ENSCSAP00000001418 | ENSCSAP00000004323 | Caspase 7; Belongs to the peptidase C14A family. | Desmin; Belongs to the intermediate filament family. | 0.522 |
CASP7 | VIM | ENSCSAP00000001418 | ENSCSAP00000008880 | Caspase 7; Belongs to the peptidase C14A family. | Vimentin; Belongs to the intermediate filament family. | 0.588 |
DES | CASP3 | ENSCSAP00000004323 | ENSCSAP00000015040 | Desmin; Belongs to the intermediate filament family. | Caspase 3; Belongs to the peptidase C14A family. | 0.481 |
DES | CASP7 | ENSCSAP00000004323 | ENSCSAP00000001418 | Desmin; Belongs to the intermediate filament family. | Caspase 7; Belongs to the peptidase C14A family. | 0.522 |
DES | ENSCSAP00000014311 | ENSCSAP00000004323 | ENSCSAP00000014311 | Desmin; Belongs to the intermediate filament family. | Ig-like domain-containing protein. | 0.420 |
DES | GFAP | ENSCSAP00000004323 | ENSCSAP00000014429 | Desmin; Belongs to the intermediate filament family. | Glial fibrillary acidic protein; Belongs to the intermediate filament family. | 0.584 |
DES | HLA-DRA | ENSCSAP00000004323 | ENSCSAP00000005619 | Desmin; Belongs to the intermediate filament family. | Major histocompatibility complex, class II, DR alpha; Belongs to the MHC class II family. | 0.621 |
DES | HLA-DRB5 | ENSCSAP00000004323 | ENSCSAP00000005635 | Desmin; Belongs to the intermediate filament family. | Ig-like domain-containing protein. | 0.420 |
DES | PAX6 | ENSCSAP00000004323 | ENSCSAP00000001567 | Desmin; Belongs to the intermediate filament family. | Paired box 6. | 0.404 |
DES | TCAP | ENSCSAP00000004323 | ENSCSAP00000015340 | Desmin; Belongs to the intermediate filament family. | Titin-cap. | 0.582 |
DES | VIM | ENSCSAP00000004323 | ENSCSAP00000008880 | Desmin; Belongs to the intermediate filament family. | Vimentin; Belongs to the intermediate filament family. | 0.746 |
ENSCSAP00000014311 | DES | ENSCSAP00000014311 | ENSCSAP00000004323 | Ig-like domain-containing protein. | Desmin; Belongs to the intermediate filament family. | 0.420 |
ENSCSAP00000014311 | HLA-DRA | ENSCSAP00000014311 | ENSCSAP00000005619 | Ig-like domain-containing protein. | Major histocompatibility complex, class II, DR alpha; Belongs to the MHC class II family. | 0.972 |
ENSCSAP00000014311 | HLA-DRB5 | ENSCSAP00000014311 | ENSCSAP00000005635 | Ig-like domain-containing protein. | Ig-like domain-containing protein. | 0.653 |
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