STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGCESarcoglycan epsilon. (473 aa)    
Predicted Functional Partners:
NMB
Neuromedin B.
     
 0.873
SSPN
Sarcospan.
   
 
 0.788
UTRN
Utrophin.
    
 0.764
SGCD
Sarcoglycan delta.
   
 0.728
RTL1
Retrotransposon Gag like 1.
   
  
 0.708
SGCB
Sarcoglycan beta.
   
 
 0.684
SGCG
Sarcoglycan gamma.
   
 0.650
BEGAIN
Brain enriched guanylate kinase associated.
   
  
 0.643
DAG1
Dystroglycan 1.
    
 0.627
TOR1A
Torsin family 1 member A.
      
 0.616
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.