Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COX11 | HTRA2 | ENSCSAP00000001846 | ENSCSAP00000011821 | Cytochrome c oxidase copper chaperone COX11. | HtrA serine peptidase 2. | 0.826 |
COX11 | MCU | ENSCSAP00000001846 | ENSCSAP00000004854 | Cytochrome c oxidase copper chaperone COX11. | Mitochondrial calcium uniporter. | 0.788 |
COX11 | NDUFA13 | ENSCSAP00000001846 | ENSCSAP00000001398 | Cytochrome c oxidase copper chaperone COX11. | NADH:ubiquinone oxidoreductase subunit A13. | 0.856 |
COX11 | NDUFA8 | ENSCSAP00000001846 | ENSCSAP00000009498 | Cytochrome c oxidase copper chaperone COX11. | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 0.801 |
COX11 | NDUFB10 | ENSCSAP00000001846 | ENSCSAP00000007436 | Cytochrome c oxidase copper chaperone COX11. | NADH:ubiquinone oxidoreductase subunit B10. | 0.813 |
COX11 | NDUFB7 | ENSCSAP00000001846 | ENSCSAP00000002607 | Cytochrome c oxidase copper chaperone COX11. | NADH:ubiquinone oxidoreductase subunit B7. | 0.852 |
COX11 | SLC25A13 | ENSCSAP00000001846 | ENSCSAP00000009171 | Cytochrome c oxidase copper chaperone COX11. | Solute carrier family 25 member 13; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.819 |
COX11 | TIMM13 | ENSCSAP00000001846 | ENSCSAP00000007770 | Cytochrome c oxidase copper chaperone COX11. | Translocase of inner mitochondrial membrane 13; Belongs to the small Tim family. | 0.907 |
COX11 | TIMM23 | ENSCSAP00000001846 | ENSCSAP00000006724 | Cytochrome c oxidase copper chaperone COX11. | Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. | 0.821 |
COX11 | TIMM8A | ENSCSAP00000001846 | ENSCSAP00000006120 | Cytochrome c oxidase copper chaperone COX11. | Translocase of inner mitochondrial membrane 8A; Belongs to the small Tim family. | 0.845 |
HTRA2 | COX11 | ENSCSAP00000011821 | ENSCSAP00000001846 | HtrA serine peptidase 2. | Cytochrome c oxidase copper chaperone COX11. | 0.826 |
HTRA2 | MCU | ENSCSAP00000011821 | ENSCSAP00000004854 | HtrA serine peptidase 2. | Mitochondrial calcium uniporter. | 0.742 |
HTRA2 | NDUFA13 | ENSCSAP00000011821 | ENSCSAP00000001398 | HtrA serine peptidase 2. | NADH:ubiquinone oxidoreductase subunit A13. | 0.832 |
HTRA2 | NDUFA8 | ENSCSAP00000011821 | ENSCSAP00000009498 | HtrA serine peptidase 2. | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 0.792 |
HTRA2 | NDUFB10 | ENSCSAP00000011821 | ENSCSAP00000007436 | HtrA serine peptidase 2. | NADH:ubiquinone oxidoreductase subunit B10. | 0.822 |
HTRA2 | NDUFB7 | ENSCSAP00000011821 | ENSCSAP00000002607 | HtrA serine peptidase 2. | NADH:ubiquinone oxidoreductase subunit B7. | 0.830 |
HTRA2 | SLC25A13 | ENSCSAP00000011821 | ENSCSAP00000009171 | HtrA serine peptidase 2. | Solute carrier family 25 member 13; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.821 |
HTRA2 | TIMM13 | ENSCSAP00000011821 | ENSCSAP00000007770 | HtrA serine peptidase 2. | Translocase of inner mitochondrial membrane 13; Belongs to the small Tim family. | 0.836 |
HTRA2 | TIMM23 | ENSCSAP00000011821 | ENSCSAP00000006724 | HtrA serine peptidase 2. | Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. | 0.644 |
HTRA2 | TIMM8A | ENSCSAP00000011821 | ENSCSAP00000006120 | HtrA serine peptidase 2. | Translocase of inner mitochondrial membrane 8A; Belongs to the small Tim family. | 0.823 |
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