Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGO1 | AGO2 | ENSCSAP00000016922 | ENSCSAP00000005830 | Argonaute RISC component 1; Belongs to the argonaute family. | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | 0.962 |
| AGO1 | FMR1 | ENSCSAP00000016922 | ENSCSAP00000003546 | Argonaute RISC component 1; Belongs to the argonaute family. | Fragile X mental retardation 1. | 0.702 |
| AGO1 | FXR1 | ENSCSAP00000016922 | ENSCSAP00000009348 | Argonaute RISC component 1; Belongs to the argonaute family. | FMR1 autosomal homolog 1. | 0.703 |
| AGO1 | FXR2 | ENSCSAP00000016922 | ENSCSAP00000007588 | Argonaute RISC component 1; Belongs to the argonaute family. | FMR1 autosomal homolog 2. | 0.540 |
| AGO2 | AGO1 | ENSCSAP00000005830 | ENSCSAP00000016922 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Argonaute RISC component 1; Belongs to the argonaute family. | 0.962 |
| AGO2 | FMR1 | ENSCSAP00000005830 | ENSCSAP00000003546 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Fragile X mental retardation 1. | 0.705 |
| AGO2 | FXR1 | ENSCSAP00000005830 | ENSCSAP00000009348 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | FMR1 autosomal homolog 1. | 0.719 |
| AGO2 | FXR2 | ENSCSAP00000005830 | ENSCSAP00000007588 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | FMR1 autosomal homolog 2. | 0.633 |
| AGO2 | G3BP1 | ENSCSAP00000005830 | ENSCSAP00000007095 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | G3BP stress granule assembly factor 1. | 0.451 |
| AGO2 | TIA1 | ENSCSAP00000005830 | ENSCSAP00000011235 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | TIA1 cytotoxic granule associated RNA binding protein. | 0.521 |
| CYFIP1 | CYFIP2 | ENSCSAP00000002845 | ENSCSAP00000006886 | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | 0.720 |
| CYFIP1 | FMR1 | ENSCSAP00000002845 | ENSCSAP00000003546 | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | Fragile X mental retardation 1. | 0.777 |
| CYFIP1 | FXR1 | ENSCSAP00000002845 | ENSCSAP00000009348 | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | FMR1 autosomal homolog 1. | 0.807 |
| CYFIP1 | FXR2 | ENSCSAP00000002845 | ENSCSAP00000007588 | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | FMR1 autosomal homolog 2. | 0.793 |
| CYFIP2 | CYFIP1 | ENSCSAP00000006886 | ENSCSAP00000002845 | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | 0.720 |
| CYFIP2 | FMR1 | ENSCSAP00000006886 | ENSCSAP00000003546 | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | Fragile X mental retardation 1. | 0.970 |
| CYFIP2 | FXR1 | ENSCSAP00000006886 | ENSCSAP00000009348 | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | FMR1 autosomal homolog 1. | 0.970 |
| CYFIP2 | FXR2 | ENSCSAP00000006886 | ENSCSAP00000007588 | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | FMR1 autosomal homolog 2. | 0.970 |
| FMR1 | AGO1 | ENSCSAP00000003546 | ENSCSAP00000016922 | Fragile X mental retardation 1. | Argonaute RISC component 1; Belongs to the argonaute family. | 0.702 |
| FMR1 | AGO2 | ENSCSAP00000003546 | ENSCSAP00000005830 | Fragile X mental retardation 1. | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | 0.705 |
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