STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNAPC5Small nuclear RNA activating complex polypeptide 5. (98 aa)    
Predicted Functional Partners:
SNAPC1
Small nuclear RNA activating complex polypeptide 1.
    
 0.981
SNAPC4
Small nuclear RNA activating complex polypeptide 4.
    
 0.977
SNAPC3
Small nuclear RNA activating complex polypeptide 3.
    
 0.939
GTF2B
General transcription factor IIB.
    
 0.874
GTF2A1
General transcription factor IIA subunit 1.
    
  0.753
GTF2A2
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.
    
  0.753
TBP
TATA-box binding protein.
    
 0.751
ADAP1
ArfGAP with dual PH domains 1.
      
 0.630
CAPN15
Calpain 15; Belongs to the peptidase C2 family.
      
 0.629
TNPO2
Transportin 2.
      
 0.624
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.