STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPP1R42Protein phosphatase 1 regulatory subunit 42. (223 aa)    
Predicted Functional Partners:
COPS4
COP9 signalosome subunit 4.
   
 0.968
COPS6
COP9 signalosome subunit 6.
   
 0.967
COPS2
COP9 signalosome subunit 2.
   
 0.966
COPS3
COP9 signalosome subunit 3.
   
 0.963
GPS1
G protein pathway suppressor 1.
   
 0.962
ENSCSAP00000018448
PCI domain-containing protein.
   
 0.962
ENSCSAP00000018574
Ubiquitin-like domain-containing protein.
   
 0.939
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.887
CUL2
Cullin 2; Belongs to the cullin family.
   
 0.870
DDB1
Damage specific DNA binding protein 1.
    
 0.865
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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