STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPS27AUbiquitin-like domain-containing protein. (156 aa)    
Predicted Functional Partners:
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
0.999
TMEM189-UBE2V1
TMEM189-UBE2V1 readthrough.
   
 0.998
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
  
0.993
RPS15
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 0.991
NBR1
NBR1 autophagy cargo receptor.
   
 0.991
UBC
Uncharacterized protein.
  
 
0.989
UBB
Uncharacterized protein.
  
 
0.986
PRKN
Parkin RBR E3 ubiquitin protein ligase.
    
0.980
ZFAND4
Zinc finger AN1-type containing 4.
   
0.975
RPL14
Ribosomal_L14e domain-containing protein.
   
 0.975
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.