Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GJB2 | MSRB3 | ENSCSAP00000018119 | ENSCSAP00000000743 | Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. | Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. | 0.404 |
| GJB2 | OTOF | ENSCSAP00000018119 | ENSCSAP00000005040 | Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. | Otoferlin. | 0.617 |
| GJB2 | PJVK | ENSCSAP00000018119 | ENSCSAP00000010348 | Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. | Pejvakin. | 0.645 |
| GJB2 | USH1C | ENSCSAP00000018119 | ENSCSAP00000001195 | Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. | USH1 protein network component harmonin. | 0.624 |
| GZMA | PJVK | ENSCSAP00000012650 | ENSCSAP00000010348 | Granzyme A; Belongs to the peptidase S1 family. | Pejvakin. | 0.625 |
| MSRB3 | GJB2 | ENSCSAP00000000743 | ENSCSAP00000018119 | Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. | Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. | 0.404 |
| MSRB3 | OTOF | ENSCSAP00000000743 | ENSCSAP00000005040 | Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. | Otoferlin. | 0.615 |
| MSRB3 | PJVK | ENSCSAP00000000743 | ENSCSAP00000010348 | Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. | Pejvakin. | 0.649 |
| MSRB3 | USH1C | ENSCSAP00000000743 | ENSCSAP00000001195 | Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. | USH1 protein network component harmonin. | 0.621 |
| MSRB3 | USH1G | ENSCSAP00000000743 | ENSCSAP00000000961 | Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. | USH1 protein network component sans. | 0.622 |
| NFE2L3 | OSBPL3 | ENSCSAP00000010308 | ENSCSAP00000010263 | Nuclear factor, erythroid 2 like 3. | Oxysterol-binding protein; Belongs to the OSBP family. | 0.627 |
| NFE2L3 | OSBPL6 | ENSCSAP00000010308 | ENSCSAP00000010357 | Nuclear factor, erythroid 2 like 3. | Oxysterol-binding protein; Belongs to the OSBP family. | 0.614 |
| NFE2L3 | PJVK | ENSCSAP00000010308 | ENSCSAP00000010348 | Nuclear factor, erythroid 2 like 3. | Pejvakin. | 0.620 |
| OSBPL3 | NFE2L3 | ENSCSAP00000010263 | ENSCSAP00000010308 | Oxysterol-binding protein; Belongs to the OSBP family. | Nuclear factor, erythroid 2 like 3. | 0.627 |
| OSBPL3 | PJVK | ENSCSAP00000010263 | ENSCSAP00000010348 | Oxysterol-binding protein; Belongs to the OSBP family. | Pejvakin. | 0.675 |
| OSBPL6 | NFE2L3 | ENSCSAP00000010357 | ENSCSAP00000010308 | Oxysterol-binding protein; Belongs to the OSBP family. | Nuclear factor, erythroid 2 like 3. | 0.614 |
| OSBPL6 | PJVK | ENSCSAP00000010357 | ENSCSAP00000010348 | Oxysterol-binding protein; Belongs to the OSBP family. | Pejvakin. | 0.625 |
| OTOF | GJB2 | ENSCSAP00000005040 | ENSCSAP00000018119 | Otoferlin. | Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. | 0.617 |
| OTOF | MSRB3 | ENSCSAP00000005040 | ENSCSAP00000000743 | Otoferlin. | Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. | 0.615 |
| OTOF | PJVK | ENSCSAP00000005040 | ENSCSAP00000010348 | Otoferlin. | Pejvakin. | 0.630 |
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