STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXA5Homeobox A5. (381 aa)    
Predicted Functional Partners:
HOXA3
Homeobox A3.
   
  
0.749
NFATC2
Nuclear factor of activated T cells 2.
      
 0.611
HOXA2
Homeobox A2.
  
 
0.546
FOXC2
Forkhead box C2.
    
 0.498
FOXC1
Forkhead box C1.
    
 0.498
PBX1
PBX homeobox 1.
    
 0.486
HOXB5
Homeobox B5.
  
   
0.471
HOXB8
Homeobox B8.
  
  
0.419
TBX15
T-box transcription factor 15.
    
 
 0.419
HOXB4
Homeobox B4.
   
 
0.401
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.