STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXD1Homeobox D1. (328 aa)    
Predicted Functional Partners:
HOXB1
Homeobox B1.
  
0.921
HOXA1
Homeobox A1.
   
 
 
0.903
NIPAL2
NIPA like domain containing 2.
      
 0.645
TXNDC16
Thioredoxin domain containing 16.
      
 0.645
CC2D1A
Coiled-coil and C2 domain containing 1A.
      
 0.636
STXBP4
Syntaxin binding protein 4.
   
 
 0.635
ZNF24
Zinc finger protein 24.
    
 0.633
KCNH3
Potassium voltage-gated channel subfamily H member 3.
      
 0.632
BBX
BBX high mobility group box domain containing.
      
 0.614
IL12RB1
Interleukin 12 receptor subunit beta 1.
      
 0.505
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.