STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXD4Homeobox D4. (255 aa)    
Predicted Functional Partners:
HOXD3
Homeobox D3.
  
  
0.955
HOXB7
Homeobox B7.
   
 
0.666
MKX
Mohawk homeobox.
   
 0.662
HOXC4
Homeobox C4.
  
 
0.657
HOXB5
Homeobox B5.
   
 
0.645
CUX2
DNA-binding protein SATB.
     
 0.630
HOXA7
Homeobox A7.
   
 
0.608
HOXB6
Homeobox B6.
   
 
0.601
HOXB4
Homeobox B4.
  
  
0.590
HOXC6
Homeobox C6.
   
 
0.582
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.