STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXD9Homeobox D9. (343 aa)    
Predicted Functional Partners:
COL2A1
Collagen type II alpha 1 chain.
      
 0.787
HOXD10
Homeobox D10.
   
  
0.783
ARID3B
AT-rich interaction domain 3B.
      
 0.620
GATAD2B
GATA zinc finger domain containing 2B.
      
 0.615
CREBRF
CREB3 regulatory factor.
      
 0.612
FOXK2
Forkhead box K2.
    
 
 0.522
HOXD8
Homeobox D8.
   
 
0.517
HOXD3
Homeobox D3.
   
 
0.452
FOXE1
Forkhead box E1.
    
 
 0.416
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.