STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP34Ubiquitin specific peptidase 34; Belongs to the peptidase C19 family. (3546 aa)    
Predicted Functional Partners:
TRIP12
Thyroid hormone receptor interactor 12.
   
 
 0.894
UBC
Uncharacterized protein.
   
 0.877
ASH1L
ASH1 like histone lysine methyltransferase.
   
 
 0.848
ANKRD17
Ankyrin repeat domain 17.
   
 0.765
SMG1
SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family.
   
   0.725
SETD2
SET domain containing 2, histone lysine methyltransferase.
   
 
 0.713
PHF3
PHD finger protein 3.
   
 
  0.707
RPS27A
Ubiquitin-like domain-containing protein.
   
 0.687
ENSCSAP00000017575
Ubiquitin-like domain-containing protein.
   
 0.687
ENSCSAP00000017765
Ubiquitin-like domain-containing protein.
   
 0.687
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.