STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM170AFamily with sequence similarity 170 member A. (331 aa)    
Predicted Functional Partners:
CDRT4
CMT1A duplicated region transcript 4.
  
    0.480
SPEM1
Spermatid maturation 1.
      
 0.430
SSMEM1
Serine rich single-pass membrane protein 1.
      
 0.428
ZMYND19
Zinc finger MYND-type containing 19.
      
 0.424
SPATA16
Spermatogenesis associated 16.
   
  
 0.421
TEKT4
Tektin 4.
   
  
 0.412
C8H8orf58
DUF4657 domain-containing protein.
  
     0.406
LY9
Lymphocyte antigen 9.
  
     0.404
SPACA1
Sperm acrosome associated 1.
      
 0.400
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.