Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BTC | ERBB2 | ENSCSAP00000001049 | ENSCSAP00000015327 | Betacellulin. | Receptor protein-tyrosine kinase. | 0.692 |
BTC | ERBB3 | ENSCSAP00000001049 | ENSCSAP00000001571 | Betacellulin. | Erb-b2 receptor tyrosine kinase 3. | 0.807 |
BTC | ERBB4 | ENSCSAP00000001049 | ENSCSAP00000005662 | Betacellulin. | Protein kinase domain-containing protein. | 0.984 |
BTC | HBEGF | ENSCSAP00000001049 | ENSCSAP00000009083 | Betacellulin. | Heparin binding EGF like growth factor. | 0.882 |
BTC | NRG1 | ENSCSAP00000001049 | ENSCSAP00000011877 | Betacellulin. | Neuregulin 1. | 0.635 |
BTC | NRG2 | ENSCSAP00000001049 | ENSCSAP00000009099 | Betacellulin. | Neuregulin 2. | 0.509 |
BTC | NRG4 | ENSCSAP00000001049 | ENSCSAP00000010779 | Betacellulin. | Neuregulin 4. | 0.645 |
ERBB2 | BTC | ENSCSAP00000015327 | ENSCSAP00000001049 | Receptor protein-tyrosine kinase. | Betacellulin. | 0.692 |
ERBB2 | ERBB3 | ENSCSAP00000015327 | ENSCSAP00000001571 | Receptor protein-tyrosine kinase. | Erb-b2 receptor tyrosine kinase 3. | 0.998 |
ERBB2 | ERBB4 | ENSCSAP00000015327 | ENSCSAP00000005662 | Receptor protein-tyrosine kinase. | Protein kinase domain-containing protein. | 0.984 |
ERBB2 | HBEGF | ENSCSAP00000015327 | ENSCSAP00000009083 | Receptor protein-tyrosine kinase. | Heparin binding EGF like growth factor. | 0.781 |
ERBB2 | NRG1 | ENSCSAP00000015327 | ENSCSAP00000011877 | Receptor protein-tyrosine kinase. | Neuregulin 1. | 0.990 |
ERBB2 | NRG2 | ENSCSAP00000015327 | ENSCSAP00000009099 | Receptor protein-tyrosine kinase. | Neuregulin 2. | 0.983 |
ERBB2 | NRG4 | ENSCSAP00000015327 | ENSCSAP00000010779 | Receptor protein-tyrosine kinase. | Neuregulin 4. | 0.791 |
ERBB3 | BTC | ENSCSAP00000001571 | ENSCSAP00000001049 | Erb-b2 receptor tyrosine kinase 3. | Betacellulin. | 0.807 |
ERBB3 | ERBB2 | ENSCSAP00000001571 | ENSCSAP00000015327 | Erb-b2 receptor tyrosine kinase 3. | Receptor protein-tyrosine kinase. | 0.998 |
ERBB3 | ERBB4 | ENSCSAP00000001571 | ENSCSAP00000005662 | Erb-b2 receptor tyrosine kinase 3. | Protein kinase domain-containing protein. | 0.973 |
ERBB3 | HBEGF | ENSCSAP00000001571 | ENSCSAP00000009083 | Erb-b2 receptor tyrosine kinase 3. | Heparin binding EGF like growth factor. | 0.825 |
ERBB3 | NRG1 | ENSCSAP00000001571 | ENSCSAP00000011877 | Erb-b2 receptor tyrosine kinase 3. | Neuregulin 1. | 0.999 |
ERBB3 | NRG2 | ENSCSAP00000001571 | ENSCSAP00000009099 | Erb-b2 receptor tyrosine kinase 3. | Neuregulin 2. | 0.987 |
page 1 of 4