Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DDR1 | PEAK1 | ENSCSAP00000004559 | ENSCSAP00000010843 | Discoidin domain receptor tyrosine kinase 1. | Pseudopodium enriched atypical kinase 1. | 0.632 |
DDR2 | PEAK1 | ENSCSAP00000015300 | ENSCSAP00000010843 | Discoidin domain receptor tyrosine kinase 2. | Pseudopodium enriched atypical kinase 1. | 0.621 |
FAM20A | PAN3 | ENSCSAP00000000600 | ENSCSAP00000013990 | FAM20A golgi associated secretory pathway pseudokinase. | PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] | 0.479 |
FAM20A | PEAK1 | ENSCSAP00000000600 | ENSCSAP00000010843 | FAM20A golgi associated secretory pathway pseudokinase. | Pseudopodium enriched atypical kinase 1. | 0.610 |
FAM20A | STKLD1 | ENSCSAP00000000600 | ENSCSAP00000011338 | FAM20A golgi associated secretory pathway pseudokinase. | Serine/threonine kinase like domain containing 1. | 0.636 |
FAM20A | TRRAP | ENSCSAP00000000600 | ENSCSAP00000013789 | FAM20A golgi associated secretory pathway pseudokinase. | Transformation/transcription domain associated protein; Belongs to the PI3/PI4-kinase family. | 0.519 |
ITSN2 | PEAK1 | ENSCSAP00000004709 | ENSCSAP00000010843 | Intersectin 2. | Pseudopodium enriched atypical kinase 1. | 0.663 |
ITSN2 | RHOU | ENSCSAP00000004709 | ENSCSAP00000006864 | Intersectin 2. | Ras homolog family member U. | 0.989 |
ITSN2 | RHOV | ENSCSAP00000004709 | ENSCSAP00000003864 | Intersectin 2. | Ras homolog family member V. | 0.989 |
ITSN2 | RND2 | ENSCSAP00000004709 | ENSCSAP00000014657 | Intersectin 2. | Rho family GTPase 2. | 0.989 |
PAN3 | FAM20A | ENSCSAP00000013990 | ENSCSAP00000000600 | PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] | FAM20A golgi associated secretory pathway pseudokinase. | 0.479 |
PAN3 | PEAK1 | ENSCSAP00000013990 | ENSCSAP00000010843 | PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] | Pseudopodium enriched atypical kinase 1. | 0.465 |
PAN3 | STKLD1 | ENSCSAP00000013990 | ENSCSAP00000011338 | PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] | Serine/threonine kinase like domain containing 1. | 0.533 |
PEAK1 | DDR1 | ENSCSAP00000010843 | ENSCSAP00000004559 | Pseudopodium enriched atypical kinase 1. | Discoidin domain receptor tyrosine kinase 1. | 0.632 |
PEAK1 | DDR2 | ENSCSAP00000010843 | ENSCSAP00000015300 | Pseudopodium enriched atypical kinase 1. | Discoidin domain receptor tyrosine kinase 2. | 0.621 |
PEAK1 | FAM20A | ENSCSAP00000010843 | ENSCSAP00000000600 | Pseudopodium enriched atypical kinase 1. | FAM20A golgi associated secretory pathway pseudokinase. | 0.610 |
PEAK1 | ITSN2 | ENSCSAP00000010843 | ENSCSAP00000004709 | Pseudopodium enriched atypical kinase 1. | Intersectin 2. | 0.663 |
PEAK1 | PAN3 | ENSCSAP00000010843 | ENSCSAP00000013990 | Pseudopodium enriched atypical kinase 1. | PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] | 0.465 |
PEAK1 | RHOU | ENSCSAP00000010843 | ENSCSAP00000006864 | Pseudopodium enriched atypical kinase 1. | Ras homolog family member U. | 0.422 |
PEAK1 | RHOV | ENSCSAP00000010843 | ENSCSAP00000003864 | Pseudopodium enriched atypical kinase 1. | Ras homolog family member V. | 0.430 |
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