STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AVL9AVL9 cell migration associated. (648 aa)    
Predicted Functional Partners:
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
      
 0.610
RAB30
RAB30, member RAS oncogene family.
      
 0.605
RAB33B
RAB33B, member RAS oncogene family.
      
 0.546
DENND11
DENN domain containing 11.
      
 0.532
RAB33A
RAB33A, member RAS oncogene family.
      
 0.519
DENND6A
DENN domain containing 6A.
      
 0.515
RAB18
RAB18, member RAS oncogene family.
      
 0.482
DENND4B
DENN domain containing 4B.
      
 0.481
DENND2A
DENN domain containing 2A.
      
 0.473
DENND1C
DENN domain containing 1C.
      
 0.450
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.