STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YTHDC2YTH domain containing 2. (1430 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
   
  0.957
NUDT21
Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]
   
 0.915
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
   
 
 0.882
CSTF1
Cleavage stimulation factor subunit 1.
   
 
 0.868
METTL14
Methyltransferase like 14; Belongs to the MT-A70-like family.
   
 
 0.862
CPSF1
Cleavage and polyadenylation specific factor 1.
   
 
 0.856
ALKBH5
AlkB homolog 5, RNA demethylase.
     
 0.820
ZC3H13
Zinc finger CCCH-type containing 13.
   
 0.814
FIP1L1
Fip1 domain-containing protein.
   
 
 0.764
SNIP1
Smad nuclear interacting protein 1.
   
 0.754
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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