Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AHSP | GATA1 | ENSCSAP00000001915 | ENSCSAP00000009373 | Alpha hemoglobin stabilizing protein. | GATA binding protein 1. | 0.524 |
AHSP | GFI1B | ENSCSAP00000001915 | ENSCSAP00000011111 | Alpha hemoglobin stabilizing protein. | Growth factor independent 1B transcriptional repressor. | 0.549 |
AHSP | NFE2 | ENSCSAP00000001915 | ENSCSAP00000001738 | Alpha hemoglobin stabilizing protein. | Nuclear factor, erythroid 2. | 0.650 |
GATA1 | AHSP | ENSCSAP00000009373 | ENSCSAP00000001915 | GATA binding protein 1. | Alpha hemoglobin stabilizing protein. | 0.524 |
GATA1 | GFI1B | ENSCSAP00000009373 | ENSCSAP00000011111 | GATA binding protein 1. | Growth factor independent 1B transcriptional repressor. | 0.708 |
GATA1 | NFE2 | ENSCSAP00000009373 | ENSCSAP00000001738 | GATA binding protein 1. | Nuclear factor, erythroid 2. | 0.594 |
GATA1 | TAL1 | ENSCSAP00000009373 | ENSCSAP00000016767 | GATA binding protein 1. | TAL bHLH transcription factor 1, erythroid differentiation factor. | 0.867 |
GFI1B | AHSP | ENSCSAP00000011111 | ENSCSAP00000001915 | Growth factor independent 1B transcriptional repressor. | Alpha hemoglobin stabilizing protein. | 0.549 |
GFI1B | GATA1 | ENSCSAP00000011111 | ENSCSAP00000009373 | Growth factor independent 1B transcriptional repressor. | GATA binding protein 1. | 0.708 |
GFI1B | KDM1A | ENSCSAP00000011111 | ENSCSAP00000017088 | Growth factor independent 1B transcriptional repressor. | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | 0.685 |
GFI1B | NCF4 | ENSCSAP00000011111 | ENSCSAP00000004055 | Growth factor independent 1B transcriptional repressor. | Neutrophil cytosolic factor 4. | 0.650 |
GFI1B | NFE2 | ENSCSAP00000011111 | ENSCSAP00000001738 | Growth factor independent 1B transcriptional repressor. | Nuclear factor, erythroid 2. | 0.599 |
GFI1B | RCOR1 | ENSCSAP00000011111 | ENSCSAP00000006391 | Growth factor independent 1B transcriptional repressor. | REST corepressor 1. | 0.648 |
GFI1B | RCOR2 | ENSCSAP00000011111 | ENSCSAP00000003172 | Growth factor independent 1B transcriptional repressor. | REST corepressor 2. | 0.578 |
GFI1B | SOX8 | ENSCSAP00000011111 | ENSCSAP00000008081 | Growth factor independent 1B transcriptional repressor. | SRY-box transcription factor 8. | 0.568 |
GFI1B | TAL1 | ENSCSAP00000011111 | ENSCSAP00000016767 | Growth factor independent 1B transcriptional repressor. | TAL bHLH transcription factor 1, erythroid differentiation factor. | 0.599 |
GFI1B | UBD | ENSCSAP00000011111 | ENSCSAP00000004330 | Growth factor independent 1B transcriptional repressor. | Ubiquitin D. | 0.660 |
KDM1A | GFI1B | ENSCSAP00000017088 | ENSCSAP00000011111 | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | Growth factor independent 1B transcriptional repressor. | 0.685 |
KDM1A | RCOR1 | ENSCSAP00000017088 | ENSCSAP00000006391 | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | REST corepressor 1. | 0.995 |
KDM1A | RCOR2 | ENSCSAP00000017088 | ENSCSAP00000003172 | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | REST corepressor 2. | 0.942 |
page 1 of 2