Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SURF4Surfeit 4. (269 aa)    
Predicted Functional Partners:
TMED2
Transmembrane p24 trafficking protein 2.
   
 0.896
TMED10
Transmembrane p24 trafficking protein 10.
   
 0.895
TMED4
Transmembrane p24 trafficking protein 4.
   
 0.826
TMED9
Transmembrane p24 trafficking protein 9.
   
 0.818
ERGIC1
Endoplasmic reticulum-golgi intermediate compartment 1.
    
 
 0.795
COPB2
Coatomer protein complex subunit beta 2.
   
 0.790
ERGIC2
ERGIC and golgi 2.
    
 
 0.783
ENSCSAP00000011647
GOLD domain-containing protein.
   
 0.779
STX18
Syntaxin 18.
     
 0.779
ARCN1
Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 
 0.779
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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