STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAE1Ribonucleic acid export 1. (368 aa)    
Predicted Functional Partners:
NUP98
Nucleoporin 98.
   
 0.999
NXF1
Nuclear RNA export factor 1.
    
 0.995
LOC103232394
Uncharacterized protein.
    
 0.983
NUP214
Nucleoporin 214.
    
 0.983
RANBP2
RAN binding protein 2.
   
 0.970
GLE1
GLE1 RNA export mediator.
   
 0.960
NUP85
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.951
NUP153
Nucleoporin 153.
    
 0.946
NUP155
Nucleoporin 155.
    
 0.930
SEH1L
SEH1 like nucleoporin; Belongs to the WD repeat SEC13 family.
   
 0.928
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.