STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCGF1Polycomb group ring finger 1. (259 aa)    
Predicted Functional Partners:
KDM2B
Lysine demethylase 2B.
   
 0.981
RNF2
Ring finger protein 2.
   
 0.965
BCOR
BCL6 corepressor.
    
 0.958
RYBP
RING1 and YY1 binding protein.
    
 0.957
SKP1
S-phase kinase associated protein 1; Belongs to the SKP1 family.
    
 0.954
RING1
Ring finger protein 1.
   
 0.932
BCORL1
BCL6 corepressor like 1.
    
 0.922
YAF2
YY1 associated factor 2.
    
 0.889
CBX4
Chromobox 4.
    
 0.848
CBX8
Chromobox 8.
    
 0.837
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.