STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMPDL3AAcid sphingomyelinase-like phosphodiesterase. (453 aa)    
Predicted Functional Partners:
BRINP1
BMP/retinoic acid inducible neural specific 1.
   
  
 0.609
TTC9C
Tetratricopeptide repeat domain 9C.
      
 0.564
SQOR
Pyr_redox_2 domain-containing protein.
      
 0.528
LOC103223040
Uncharacterized protein.
      
 0.510
CDC40
Cell division cycle 40.
      
 0.502
MUC4
Uncharacterized protein.
      
 0.465
VWDE
Von Willebrand factor D and EGF domains.
      
 0.465
BTBD10
BTB domain containing 10.
      
 0.430
ARHGAP1
Rho GTPase activating protein 1.
      
 0.430
KCTD20
Potassium channel tetramerization domain containing 20.
      
 0.430
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.