STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMPDL3AAcid sphingomyelinase-like phosphodiesterase. (453 aa)    
Predicted Functional Partners:
BRINP1
BMP/retinoic acid inducible neural specific 1.
      
 0.710
SQOR
Pyr_redox_2 domain-containing protein.
      
 0.577
ZNF330
Zinc finger protein 330.
      
 0.576
LOC103223040
Uncharacterized protein.
      
 0.566
FAM227A
Family with sequence similarity 227 member A.
      
 0.522
BTBD10
BTB domain containing 10.
      
 0.482
KCTD20
Potassium channel tetramerization domain containing 20.
      
 0.482
LYSMD2
LysM domain containing 2.
      
 0.482
TTC9C
Tetratricopeptide repeat domain 9C.
      
 0.481
KRCC1
Lysine rich coiled-coil 1.
      
 0.468
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.