STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDLIM2PDZ and LIM domain 2. (352 aa)    
Predicted Functional Partners:
NKIRAS1
NFKB inhibitor interacting Ras like 1.
      
 0.821
NSFL1C
NSFL1 cofactor.
      
 0.673
PDLIM4
PDZ and LIM domain 4.
     
0.670
MKRN2
Makorin ring finger protein 2.
    
 
 0.621
MYO6
Myosin VI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.570
LDB3
LIM domain binding 3.
    
0.566
PDLIM5
PDZ and LIM domain 5.
     
 0.557
PDLIM7
PDZ and LIM domain 7.
     
0.557
PDLIM3
PDZ and LIM domain 3.
     
0.543
PDLIM1
PDZ and LIM domain 1.
     
0.541
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.