STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LDB2Uncharacterized protein. (79 aa)    
Predicted Functional Partners:
LMO1
LIM domain only 1.
    
 0.835
TAL1
TAL bHLH transcription factor 1, erythroid differentiation factor.
    
 0.822
LMO2
LIM domain only 2.
    
 0.789
LHX2
LIM homeobox 2.
    
 0.647
LHX9
LIM homeobox 9.
    
 0.647
LMO4
LIM domain only 4.
   
 0.557
GATA2
GATA binding protein 2.
    
 0.544
LHX4
LIM homeobox 4.
    
 0.544
GATA3
GATA binding protein 3.
    
 0.544
LHX3
LIM homeobox 3.
    
 0.544
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.