Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CIB1Calcium and integrin binding 1. (191 aa)    
Predicted Functional Partners:
THOP1
Thimet oligopeptidase 1.
    
 
 0.858
ARHGEF1
Rho guanine nucleotide exchange factor 1.
      
 0.856
SPICE1
Uncharacterized protein.
      
 0.852
CHD6
Chromodomain helicase DNA binding protein 6.
    
 0.848
HTR5A
5-hydroxytryptamine receptor 5A.
     
 0.847
NEDD9
Neural precursor cell expressed, developmentally down-regulated 9.
   
 0.842
NIN
Ninein.
    
 0.835
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A.
    
 0.824
GPR37
G protein-coupled receptor 37.
     
 0.816
LUM
Lumican.
    
 0.808
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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