STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UNC50Unc-50 inner nuclear membrane RNA binding protein. (259 aa)    
Predicted Functional Partners:
ARFRP1
ADP ribosylation factor related protein 1.
    
 
 0.692
SLC35A2
Solute carrier family 35 member A2.
   
  
 0.682
TM9SF2
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
      
 0.631
RIC3
RIC3 acetylcholine receptor chaperone.
      
 0.611
TMX3
Thioredoxin related transmembrane protein 3.
      
 0.550
UGCG
UDP-glucose ceramide glucosyltransferase.
      
 0.536
SPTSSA
Serine palmitoyltransferase small subunit A.
      
 0.529
PIGZ
Mannosyltransferase.
      
 0.511
AKAP17A
A-kinase anchoring protein 17A.
      
 0.508
ARHGAP6
Rho GTPase activating protein 6.
      
 0.506
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.