STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MBD1Methyl-CpG binding domain protein 1. (605 aa)    
Predicted Functional Partners:
MORC3
MORC family CW-type zinc finger 3.
      
 0.729
CFAP53
Cilia and flagella associated protein 53.
 
      0.687
CFAP52
Cilia and flagella associated protein 52.
   
 0.667
ZNF462
Zinc finger protein 462.
    
 0.654
SETX
Senataxin.
   
 
 0.633
CFAP45
Cilia and flagella associated protein 45.
   
 0.616
TEKT2
Tektin 2.
   
 
 0.614
MNS1
Meiosis specific nuclear structural 1.
   
 0.595
TEKT3
Tektin 3.
   
 
 0.562
EFHC2
EF-hand domain containing 2.
   
 
 0.553
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.