STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ONECUT2One cut domain family member. (504 aa)    
Predicted Functional Partners:
LHFPL4
LHFPL tetraspan subfamily member 4.
      
 0.770
KLF14
Kruppel like factor 14.
    
 
 0.761
ZNF507
Zinc finger protein 507.
    
 
 0.754
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
      
 0.629
VGF
VGF nerve growth factor inducible.
      
 0.619
VXN
Vexin.
      
 0.616
CMSS1
Cms1 ribosomal small subunit homolog.
      
 0.585
MGARP
Mitochondria localized glutamic acid rich protein.
      
 0.585
NPVF
Neuropeptide VF precursor.
      
 0.573
TFAP2C
Transcription factor AP-2 gamma.
   
 
 0.567
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.