STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS4BVacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. (444 aa)    
Predicted Functional Partners:
VTA1
Vesicle trafficking 1.
   
 0.996
CHMP1A
Charged multivesicular body protein 1A.
   
 0.995
CHMP5
Charged multivesicular body protein 5.
   
 0.990
VPS4A
Uncharacterized protein; Belongs to the AAA ATPase family.
  
 
0.982
CHMP6
Charged multivesicular body protein 6.
    
 0.976
CHMP2A
Charged multivesicular body protein 2A.
    
 0.969
CHMP2B
Charged multivesicular body protein 2B.
   
 0.965
IST1
IST1 factor associated with ESCRT-III.
   
 0.962
CHMP3
Charged multivesicular body protein 3.
   
 0.958
CHMP4C
Charged multivesicular body protein 4C.
    
 0.929
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.