STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB33BRAB33B, member RAS oncogene family. (229 aa)    
Predicted Functional Partners:
ATG16L2
Autophagy related 16 like 2.
    
 0.979
ATG16L1
Autophagy related 16 like 1.
    
 
 0.963
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
    
 0.819
TBC1D25
TBC1 domain family member 25.
     
 0.803
RAB33A
RAB33A, member RAS oncogene family.
  
 
 
0.788
TRAPPC1
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.728
TRAPPC8
Trafficking protein particle complex 8.
    
 0.723
TRAPPC4
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.712
TRAPPC5
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.705
RABGGTB
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 0.662
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.