STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBTFUpstream binding transcription factor. (701 aa)    
Predicted Functional Partners:
POLR1E
RNA polymerase I subunit E.
    
 0.763
POLR1A
RNA polymerase I subunit A.
    
 0.747
RRN3
RRN3 homolog, RNA polymerase I transcription factor.
    
 0.744
POLR1B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.700
TAF1A
TATA-box binding protein associated factor, RNA polymerase I subunit A.
   
 0.695
GTF2H3
General transcription factor IIH subunit 3.
    
 0.671
GTF2H1
General transcription factor IIH subunit 1.
    
 0.666
ERCC3
ERCC excision repair 3, TFIIH core complex helicase subunit.
   
 0.664
TBP
TATA-box binding protein.
   
 0.662
GTF2H2
General transcription factor IIH subunit.
    
 0.655
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.