Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LASP1LIM and SH3 protein 1. (261 aa)    
Predicted Functional Partners:
ZYX
Zyxin.
    
 
 0.819
ANKRD54
Ankyrin repeat domain 54.
    
 
 0.727
TXK
Tyrosine-protein kinase.
      
 0.686
CRYBA2
Crystallin beta A2; Belongs to the beta/gamma-crystallin family.
    
   0.582
XIRP2
Xin actin binding repeat containing 2.
   
 0.552
TRIP13
Thyroid hormone receptor interactor 13.
    
   0.552
VAV1
Vav guanine nucleotide exchange factor 1.
      
 0.545
RPL28
Ribosomal_L28e domain-containing protein.
      
 0.542
LPP
LIM domain containing preferred translocation partner in lipoma.
    
 
 0.530
MLLT6
MLLT6, PHD finger containing.
      
 0.505
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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